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  • Top cofit genes for GFF1504 from Variovorax sp. SCN45

    Alkylhydroperoxidase AhpD domain protein
    SEED: Alkylhydroperoxidase AhpD domain protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6139 Serine/threonine kinase no 0.61
    2 GFF6333 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) no 0.60
    3 GFF557 Plectin 1 no 0.59
    4 GFF5799 Urea ABC transporter, substrate-binding protein UrtA no 0.57
    5 GFF4377 putative plasmid stabilization protein no 0.57
    6 GFF1667 N-methylhydantoinase B (EC 3.5.2.14) no 0.57
    7 GFF4159 no description no 0.56
    8 GFF250 Homoserine/homoserine lactone efflux protein no 0.56
    9 GFF4210 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases no 0.55
    10 GFF3790 Formyltetrahydrofolate deformylase (EC 3.5.1.10) no 0.54
    11 GFF3962 Opine dehydrogenase (EC 1.5.1.28) no 0.54
    12 GFF811 Glutathione S-transferase (EC 2.5.1.18) no 0.52
    13 GFF5544 FIG001614: Membrane protein 0.54 0.52
    14 GFF95 hypothetical protein no 0.52
    15 GFF318 Uncharacterized protein YjgR no 0.51
    16 GFF5393 mandelate racemase/muconate lactonizing enzyme family protein no 0.51
    17 GFF636 Urea ABC transporter, substrate-binding protein UrtA no 0.50
    18 GFF6088 Phenylacetic acid degradation protein PaaY no 0.50
    19 GFF3313 Response regulator CreB of two-component signal transduction system CreBC no 0.50
    20 GFF2752 FIG00974677: hypothetical protein no 0.50

    Or look for negative cofitness