• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for PS417_07635 from Pseudomonas simiae WCS417

    transcription-repair coupling factor
    SEED: Transcription-repair coupling factor
    KEGG: transcription-repair coupling factor (superfamily II helicase)

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_25395 excinuclease ABC subunit A 0.96 0.49
    2 PS417_18685 excinuclease ABC subunit B 0.85 0.45
    3 PS417_04295 peptidase PmbA 0.91 0.37
    4 PS417_12200 microcin ABC transporter permease 0.46 0.36
    5 PS417_22575 exonuclease I 0.60 0.35
    6 PS417_20800 recombination protein RecR 0.95 0.34
    7 PS417_04285 protease TldD 0.95 0.34
    8 PS417_07070 membrane protein no 0.33
    9 PS417_00015 recombinase RecF 0.81 0.33
    10 PS417_13500 ATP-dependent DNA helicase 0.50 0.33
    11 PS417_24070 recombination and repair protein 0.89 0.31
    12 PS417_26370 RNA helicase 0.50 0.31
    13 PS417_24335 50S rRNA methyltransferase no 0.31
    14 PS417_01340 agmatine deiminase 0.36 0.31
    15 PS417_07090 histidine kinase 0.63 0.31
    16 PS417_27115 putrescine ABC transporter, ATPase component (from data) 0.81 0.29
    17 PS417_12205 hypothetical protein 0.67 0.29
    18 PS417_04435 uracil phosphoribosyltransferase 0.28 0.29
    19 PS417_15115 exonuclease SbcD 0.41 0.29
    20 PS417_21630 magnesium transporter 0.38 0.29

    Or look for negative cofitness