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  • Top cofit genes for GFF1500 from Variovorax sp. SCN45

    Transcriptional regulator, IclR family
    SEED: Transcriptional regulator, IclR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3291 no description no 0.58
    2 GFF6262 Transcriptional regulator PhnF no 0.57
    3 GFF897 putative oxygenase subunit 0.23 0.55
    4 GFF1592 Response regulator/GGDEF/EAL domain protein no 0.52
    5 GFF4950 ABC transporter, permease protein (cluster 2, ribose/xylose/arabinose/galactose) no 0.51
    6 GFF1829 4-hydroxybenzoyl-CoA thioesterase (EC 3.1.2.23) no 0.49
    7 GFF3247 FIG027190: Putative transmembrane protein no 0.49
    8 GFF3073 Fatty acid hydroxylase family (carotene hydroxylase/sterol desaturase) no 0.47
    9 GFF4461 hypothetical protein no 0.47
    10 GFF5382 BUG/TctC family periplasmic protein 0.20 0.46
    11 GFF7119 Ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA no 0.46
    12 GFF4601 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.45
    13 GFF4021 Uncharacterized MFS-type transporter no 0.45
    14 GFF3225 hypothetical protein no 0.45
    15 GFF4232 no description no 0.45
    16 GFF1473 Amidase family protein BBta_1912 no 0.45
    17 GFF1135 hypothetical protein no 0.44
    18 GFF7226 hypothetical protein no 0.44
    19 GFF7334 Nucleoside-diphosphate-sugar epimerases no 0.43
    20 GFF6998 Flagellar basal-body rod protein FlgB no 0.43

    Or look for negative cofitness