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  • Top cofit genes for PS417_00755 from Pseudomonas simiae WCS417

    biofilm PGA synthesis protein PgaD
    SEED: Biofilm PGA synthesis auxiliary protein PgaD
    KEGG: biofilm PGA synthesis protein PgaD

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_19825 ATPase AAA 0.37 0.26
    2 PS417_07095 histidine kinase no 0.25
    3 PS417_19710 flagellar biosynthesis protein FlhA no 0.24
    4 PS417_18705 succinate dehydrogenase no 0.24
    5 PS417_19740 flagellar biosynthesis protein flip 0.50 0.24
    6 PS417_04295 peptidase PmbA no 0.24
    7 PS417_00740 membrane protein 0.95 0.24
    8 PS417_07130 RNA polymerase sigma-H factor AlgU no 0.24
    9 PS417_19830 flagellar assembly protein FliT no 0.23
    10 PS417_19705 flagellar biosynthesis regulator FlhF no 0.23
    11 PS417_19765 flagellar hook-length control protein no 0.23
    12 PS417_19755 flagellar motor switch protein FliM no 0.23
    13 PS417_00625 taurine dioxygenase no 0.23
    14 PS417_19880 flagellar basal body L-ring protein no 0.23
    15 PS417_19695 flagellar biosynthesis sigma factor 0.43 0.22
    16 PS417_00750 N-glycosyltransferase 0.92 0.22
    17 PS417_19725 flagellar biosynthesis protein FlhB 0.43 0.22
    18 PS417_21585 flagellar basal body P-ring biosynthesis protein FlgA no 0.22
    19 PS417_19745 flagellar assembly protein FliO no 0.22
    20 PS417_24145 hypothetical protein no 0.22

    Or look for negative cofitness