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  • Top cofit genes for PS417_07625 from Pseudomonas simiae WCS417

    helicase
    SEED: COG0553: Superfamily II DNA/RNA helicases, SNF2 family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_27070 alpha/beta hydrolase no 0.38
    2 PS417_06770 multidrug transporter 0.30 0.38
    3 PS417_19940 membrane protein no 0.38
    4 PS417_06775 antibiotic transporter 0.31 0.36
    5 PS417_15075 NAD-glutamate dehydrogenase no 0.36
    6 PS417_25405 catalase no 0.33
    7 PS417_28070 phosphate ABC transporter ATP-binding protein no 0.33
    8 PS417_02255 lipopolysaccharide kinase no 0.32
    9 PS417_11460 divalent metal cation transporter MntH no 0.32
    10 PS417_00440 N-acetylmuramoyl-L-alanine amidase no 0.31
    11 PS417_05590 iron ABC transporter ATP-binding protein 0.32 0.30
    12 PS417_28080 phosphate ABC transporter permease no 0.30
    13 PS417_03990 ligand-gated channel protein no 0.30
    14 PS417_00655 DSBA oxidoreductase no 0.30
    15 PS417_11940 TonB-dependent receptor no 0.29
    16 PS417_09620 lipopolysaccharide biosynthesis protein no 0.29
    17 PS417_04495 LITAF-like zinc ribbon domain containing protein no 0.29
    18 PS417_02525 iron ABC transporter permease no 0.29
    19 PS417_27295 hypothetical protein no 0.28
    20 PS417_07515 aconitate hydratase no 0.28

    Or look for negative cofitness