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  • Top cofit genes for GFF1499 from Variovorax sp. SCN45

    BUG/TctC family periplasmic protein
    SEED: Tricarboxylate transport protein TctC

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4487 putative secreted protein no 0.67
    2 GFF907 Transcriptional regulator, LysR family no 0.65
    3 GFF7113 hypothetical protein no 0.60
    4 GFF4699 ABC transporter, substrate-binding protein (cluster 1, maltose/g3p/polyamine/iron) no 0.60
    5 GFF3489 Transcriptional regulator, AcrR family no 0.58
    6 GFF5193 Galactofuranose ABC transporter, substrate-binding protein no 0.58
    7 GFF2786 Sulfate transporter family protein no 0.57
    8 GFF298 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase (EC 2.1.1.177) no 0.57
    9 GFF3368 Pyrimidine permease no 0.56
    10 GFF1852 FHA domain protein no 0.56
    11 GFF6478 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) no 0.55
    12 GFF5266 Transaldolase (EC 2.2.1.2) no 0.54
    13 GFF814 BUG/TctC family periplasmic protein no 0.53
    14 GFF2105 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) no 0.53
    15 GFF1466 Quinone oxidoreductase (EC 1.6.5.5) no 0.52
    16 GFF2102 no description no 0.52
    17 GFF6037 Transcriptional regulator, Crp/Fnr family no 0.52
    18 GFF7046 FIG00854755: hypothetical protein no 0.52
    19 GFF6905 Chloride channel protein no 0.51
    20 GFF6526 Peptide-methionine (S)-S-oxide reductase MsrA (EC 1.8.4.11) no 0.51

    Or look for negative cofitness