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  • Top cofit genes for PS417_07615 from Pseudomonas simiae WCS417

    TetR family transcriptional regulator
    SEED: Predicted transcriptional regulator for fatty acid degradation FadQ, TetR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_06365 RNA polymerase sigma factor 0.86 0.57
    2 PS417_16370 chemotaxis protein CheY 0.64 0.54
    3 PS417_19560 amino acid ABC transporter substrate-binding protein 0.61 0.52
    4 PS417_10720 chemotaxis protein CheY 0.57 0.52
    5 PS417_27605 hypothetical protein 0.69 0.48
    6 PS417_09640 capsular biosynthesis protein 0.43 0.48
    7 PS417_12550 chemotaxis protein no 0.45
    8 PS417_16160 ABC transporter substrate-binding protein no 0.45
    9 PS417_13940 racemase no 0.44
    10 PS417_24885 transcriptional regulator no 0.44
    11 PS417_24595 histidine kinase 0.68 0.43
    12 PS417_28265 pyridoxamine kinase no 0.43
    13 PS417_21375 ADP-ribosylglycohydrolase 0.58 0.41
    14 PS417_09620 lipopolysaccharide biosynthesis protein no 0.40
    15 PS417_22610 pilus assembly protein PilZ no 0.39
    16 PS417_10645 magnesium ABC transporter ATPase no 0.39
    17 PS417_09630 glycosyl transferase no 0.39
    18 PS417_09635 mannose-1-phosphate guanylyltransferase no 0.39
    19 PS417_09665 dimethylglycine dehydrogenase no 0.38
    20 PS417_06970 LysR family transcriptional regulator no 0.38

    Or look for negative cofitness