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  • Top cofit genes for PS417_07560 from Pseudomonas simiae WCS417

    universal stress protein UspA
    SEED: Universal stress protein family COG0589
    KEGG: universal stress protein A

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_04060 dipeptide ABC transporter, permease component (from data) no 0.37
    2 PS417_16990 acyl-CoA dehydrogenase 0.64 0.36
    3 PS417_12205 hypothetical protein no 0.36
    4 PS417_16510 Clp protease ClpX 0.60 0.36
    5 PS417_25835 hypothetical protein 0.51 0.36
    6 PS417_14065 UTP--glucose-1-phosphate uridylyltransferase 0.72 0.35
    7 PS417_25840 SpoVR family protein 0.52 0.33
    8 PS417_04070 porin no 0.33
    9 PS417_22780 XRE family transcriptional regulator no 0.33
    10 PS417_04055 peptide transporter 0.46 0.33
    11 PS417_23910 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.72 0.31
    12 PS417_02975 3-dehydroquinate dehydratase no 0.31
    13 PS417_16500 arginyl-tRNA-protein transferase 0.46 0.31
    14 PS417_04075 peptide ABC transporter substrate-binding protein no 0.31
    15 PS417_00335 cytochrome B561 no 0.30
    16 PS417_26230 electron transfer flavoprotein subunit alpha no 0.30
    17 PS417_23250 S-adenosylmethionine tRNA ribosyltransferase 0.34 0.30
    18 PS417_04340 ribosome hibernation promoting factor HPF 0.55 0.30
    19 PS417_25650 anhydro-N-acetylmuramic acid kinase 0.79 0.30
    20 PS417_12195 ABC transporter permease 0.81 0.30

    Or look for negative cofitness