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  • Top cofit genes for GFF1486 from Variovorax sp. SCN45

    Tetrapartite efflux system, inner membrane component FusBC-like

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6126 putative membrane protein 0.44 0.57
    2 GFF1039 Far-related protein no 0.55
    3 GFF870 TonB-dependent receptor no 0.54
    4 GFF3983 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) / ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.54
    5 GFF4101 N-methylhydantoinase B (EC 3.5.2.14) no 0.52
    6 GFF1591 FIG066100: Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor no 0.52
    7 GFF5878 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) no 0.52
    8 GFF189 Negative transcriptional regulator no 0.51
    9 GFF6581 Coupling protein VirD4, ATPase required for T-DNA transfer no 0.50
    10 GFF6820 hypothetical protein no 0.50
    11 GFF924 hypothetical protein no 0.50
    12 GFF5388 Two-component response regulatory protein BP2547 no 0.50
    13 GFF313 FIG027190: Putative transmembrane protein no 0.49
    14 GFF4713 Uncharacterized protein YhiN no 0.49
    15 GFF5897 hypothetical protein no 0.49
    16 GFF6385 Mll4878 protein no 0.49
    17 GFF2899 no description no 0.48
    18 GFF2033 no description no 0.48
    19 GFF5621 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.47
    20 GFF499 hypothetical protein no 0.47

    Or look for negative cofitness