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Gene
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Cofit
Protein
Homologs
Top cofit genes for GFF1481 from
Variovorax sp. SCN45
L-carnitine dehydratase/bile acid-inducible protein F
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF6347
AAA+ ATPase superfamily protein YifB/ComM, associated with DNA recombination
no
0.65
2
GFF5239
hypothetical protein
no
0.63
3
GFF6819
hypothetical protein
no
0.58
4
GFF3995
hypothetical protein
no
0.57
5
GFF6510
Gamma-glutamyltranspeptidase (EC 2.3.2.2)
no
0.57
6
GFF1977
L-asparaginase (EC 3.5.1.1)
no
0.54
7
GFF3154
no description
no
0.54
8
GFF3733
no description
no
0.53
9
GFF7161
Transcriptional regulator, LysR family
no
0.53
10
GFF2114
3-methylmercaptopropionyl-CoA ligase (EC 6.2.1.44) of DmdB2 type
no
0.53
11
GFF803
MutT/Nudix family protein
no
0.52
12
GFF6613
no description
no
0.52
13
GFF6964
Cytochrome c oxidase (cbb3-type) subunit CcoN (EC 1.9.3.1)
0.34
0.52
14
GFF7247
no description
no
0.52
15
GFF2723
Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit
no
0.52
16
GFF5785
FIG00931285: hypothetical protein
no
0.52
17
GFF592
Glutamyl-Q tRNA(Asp) synthetase
no
0.51
18
GFF379
Ribonuclease HII (EC 3.1.26.4)
no
0.51
19
GFF5905
FIG01150669: hypothetical protein
no
0.51
20
GFF112
ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines)
no
0.51
Or look for
negative cofitness