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  • Top cofit genes for GFF148 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Chromosome initiation inhibitor

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3050 Lactam utilization protein LamB no 0.52
    2 GFF2602 no description no 0.50
    3 GFF2913 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.48
    4 GFF601 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases no 0.47
    5 GFF4661 no description no 0.47
    6 GFF7084 Mobile element protein no 0.46
    7 GFF4653 Cytochrome c peroxidase (EC 1.11.1.5) no 0.45
    8 GFF4508 no description no 0.45
    9 GFF777 no description no 0.45
    10 GFF2556 UPF0337 family protein no 0.44
    11 GFF4146 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) no 0.44
    12 GFF4725 Anthranilate phosphoribosyltransferase-like protein no 0.44
    13 GFF2859 Excinuclease ABC subunit C no 0.44
    14 GFF2948 salicylate esterase no 0.44
    15 GFF5942 hypothetical protein no 0.44
    16 GFF1258 FIG00348129: hypothetical protein no 0.43
    17 GFF3388 Transcriptional regulator, AcrR family no 0.43
    18 GFF2215 L,D-transpeptidase no 0.43
    19 GFF4540 hypothetical protein no 0.42
    20 GFF5184 no description no 0.42

    Or look for negative cofitness