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  • Top cofit genes for GFF1474 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7336 Alkanesulfonate utilization operon LysR-family regulator Cbl no 0.57
    2 GFF5007 probable membrane protein STY4873 no 0.55
    3 GFF3696 mRNA 3-end processing factor no 0.55
    4 GFF2980 Intracellular PHB depolymerase PhaZ2 no 0.55
    5 GFF3573 Efflux ABC transporter, ATP-binding protein no 0.54
    6 GFF3075 Surface antigen no 0.54
    7 GFF1659 Uncharacterized MFS-type transporter no 0.53
    8 GFF6666 Transcriptional regulator protein no 0.52
    9 GFF2608 Transcriptional regulator FrcR for fructose utilization, ROK family no 0.52
    10 GFF6084 Aerotolerance protein BatA no 0.50
    11 GFF3224 no description no 0.50
    12 GFF4694 no description no 0.50
    13 GFF6657 Outer membrane factor (OMF) lipoprotein associated wth MdtABC efflux system no 0.49
    14 GFF5360 Putative transmembrane protein no 0.48
    15 GFF5260 Uncharacterized protein ygiD no 0.48
    16 GFF4262 hypothetical protein no 0.47
    17 GFF3186 FIG01046500: hypothetical protein no 0.47
    18 GFF157 Methyltransferase type 12 no 0.47
    19 GFF2924 BUG/TctC family periplasmic protein no 0.47
    20 GFF3219 hypothetical protein no 0.47

    Or look for negative cofitness