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  • Top cofit genes for GFF1472 from Variovorax sp. SCN45

    Tricarboxylate transport protein TctC
    SEED: Tricarboxylate transport protein TctC

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3747 putative esterase no 0.57
    2 GFF3344 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains no 0.54
    3 GFF6073 Tripartite tricarboxylate transporter TctA family no 0.54
    4 GFF1690 KEGG: DNA-binding protein H-NS no 0.53
    5 GFF4269 Uncharacterized SAM-dependent O-methyltransferase no 0.53
    6 GFF4973 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) no 0.53
    7 GFF472 hypothetical protein no 0.52
    8 GFF3438 Amidohydrolase family protein no 0.52
    9 GFF4403 Mobile element protein no 0.52
    10 GFF3029 T6SS component TssM (IcmF/VasK) no 0.52
    11 GFF4788 Uncharacterized protein COG3236 no 0.51
    12 GFF7215 Transcriptional regulator, LysR family no 0.51
    13 GFF5999 DNA polymerase IV (EC 2.7.7.7) no 0.50
    14 GFF4002 Putative transmembrane protein no 0.50
    15 GFF6830 penicillin amidase family protein no 0.49
    16 GFF3085 no description no 0.49
    17 GFF6439 Transcriptional regulator, LysR family no 0.49
    18 GFF1252 Alkanesulfonate ABC transporter permease protein SsuC no 0.49
    19 GFF6256 Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL (EC 2.7.8.37) no 0.49
    20 GFF5164 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) no 0.48

    Or look for negative cofitness