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Cofit
Protein
Homologs
Top cofit genes for GFF147 from
Variovorax sp. SCN45
Transcriptional regulator
SEED: Transcriptional regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF1304
Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4)
no
0.58
2
GFF2590
Isocitrate dehydrogenase [NAD] (EC 1.1.1.41)
no
0.58
3
GFF313
FIG027190: Putative transmembrane protein
no
0.53
4
GFF4648
Inner-membrane proton/drug antiporter (MSF type) of tripartite multidrug efflux system
no
0.53
5
GFF1039
Far-related protein
no
0.52
6
GFF1986
Oxidoreductase, short-chain dehydrogenase/reductase family
no
0.49
7
GFF4947
Erythritol kinase EryA (EC 2.7.1.27)
no
0.48
8
GFF2464
Sensory histidine kinase BaeS
no
0.48
9
GFF5192
2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26)
no
0.48
10
GFF6189
Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase
no
0.47
11
GFF5223
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117)
no
0.47
12
GFF5290
hypothetical protein
no
0.47
13
GFF1607
D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.2)
no
0.46
14
GFF1027
Ribonuclease BN
no
0.46
15
GFF4402
Mobile element protein
no
0.46
16
GFF1381
Peptidase M48, Ste24p
no
0.45
17
GFF1630
Esterase/lipase
no
0.45
18
GFF761
FIG00537905: hypothetical protein
no
0.45
19
GFF4403
Mobile element protein
no
0.45
20
GFF4003
FIGfam005179
no
0.45
Or look for
negative cofitness