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  • Top cofit genes for PS417_07465 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Cyn operon transcriptional activator

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_18480 permease 0.46 0.28
    2 PS417_10340 alcohol dehydrogenase no 0.22
    3 PS417_22765 InaA protein no 0.21
    4 PS417_18485 membrane protein 0.40 0.20
    5 PS417_21135 Asp/Glu/hydantoin racemase no 0.20
    6 PS417_14395 fe2+ zn2+ uptake regulation protein no 0.20
    7 PS417_19515 histidine kinase no 0.20
    8 PS417_09540 penicillin-binding protein 2 no 0.19
    9 PS417_20785 transcriptional regulator no 0.19
    10 PS417_18545 cell division protein no 0.19
    11 PS417_06755 porin no 0.19
    12 PS417_23415 AraC family transcriptional regulator no 0.19
    13 PS417_01795 glucosyltransferase MdoH no 0.18
    14 PS417_22020 pili assembly chaperone no 0.18
    15 PS417_11950 hypothetical protein no 0.18
    16 PS417_25315 membrane protein no 0.18
    17 PS417_05915 spermidine dehydrogenase no 0.18
    18 PS417_22845 membrane protein no 0.18
    19 PS417_25360 Isochorismatase no 0.18
    20 PS417_10160 hypothetical protein no 0.17

    Or look for negative cofitness