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  • Top cofit genes for GFF1466 from Sphingobium sp. HT1-2

    RNA polymerase sigma-54 factor RpoN
    SEED: RNA polymerase sigma-54 factor RpoN
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2714 FIG006045: Sigma factor, ECF subfamily no 0.74
    2 GFF3287 hypothetical protein no 0.71
    3 GFF1409 Nicotinate phosphoribosyltransferase (EC 6.3.4.21) no 0.71
    4 GFF5219 hypothetical protein no 0.69
    5 GFF3344 Mlr0862 protein no 0.65
    6 GFF501 hypothetical protein no 0.65
    7 GFF4659 Arsenical-resistance protein ACR3 no 0.63
    8 GFF1067 putative phospholipase D family protein no 0.62
    9 GFF408 TonB-dependent receptor no 0.61
    10 GFF3689 TonB-dependent receptor no 0.61
    11 GFF4499 hypothetical protein no 0.60
    12 GFF1828 Uncharacterized DUF1427 protein PA2697 no 0.59
    13 GFF4320 hypothetical protein no 0.58
    14 GFF224 hypothetical protein no 0.58
    15 GFF4354 hypothetical protein no 0.58
    16 GFF2779 Cytochrome c550, associated with quino(hemo)protein alcohol dehydrogenase (EC 1.1.99.8) no 0.58
    17 GFF5340 Phage integrase no 0.57
    18 GFF4639 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.57
    19 GFF691 Arylsulfatase (EC 3.1.6.1) no 0.56
    20 GFF2159 hypothetical protein no 0.56

    Or look for negative cofitness