Top cofit genes for GFF1465 from Hydrogenophaga sp. GW460-11-11-14-LB1

RNA polymerase sigma factor RpoE

Rank	Hit	Name	Description	Conserved?	Cofitness
1	GFF1239		FIG00933538: hypothetical protein	no	0.55
2	GFF207		Nucleoside ABC transporter, permease protein 2	no	0.54
3	GFF367		Isoquinoline 1-oxidoreductase beta subunit (EC 1.3.99.16)	no	0.53
4	GFF3339		RNA polymerase sigma factor RpoE	no	0.53
5	GFF1913		Permease of the drug/metabolite transporter (DMT) superfamily	no	0.52
6	GFF2515		Phosphoenolpyruvate synthase (EC 2.7.9.2)	no	0.52
7	GFF206		Nucleoside ABC transporter, permease protein 1	no	0.51
8	GFF634		tRNA dihydrouridine synthase B (EC 1.-.-.-)	no	0.51
9	GFF817		Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-)	no	0.51
10	GFF1021		Mobile element protein	no	0.50
11	GFF401		Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A	no	0.50
12	GFF4908		Membrane-associated zinc metalloprotease	no	0.49
13	GFF3606		hypothetical protein	no	0.48
14	GFF90		Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22)	no	0.47
15	GFF2578		Two-component system response regulator QseB	no	0.47
16	GFF1204		Regulatory protein of benzoate catabolism	no	0.47
17	GFF408		3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)	no	0.46
18	GFF210		Adenosine deaminase (EC 3.5.4.4)	no	0.45
19	GFF4759		Polysaccharide biosynthesis protein	no	0.45
20	GFF2244		putative exported protein	no	0.44

Or look for negative cofitness