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  • Top cofit genes for GFF1463 from Variovorax sp. SCN45

    Spermidine/putrescine import ABC transporter ATP-binding protein PotA (TC 3.A.1.11.1)
    SEED: Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1)
    KEGG: iron(III) transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6239 Catalase KatE-intracellular protease (EC 1.11.1.6) no 0.51
    2 GFF5329 SAM-dependent methyltransferase no 0.50
    3 GFF4407 Alkan-1-ol dehydrogenase, PQQ-dependent (EC 1.1.99.20) no 0.49
    4 GFF4409 Aldehyde dehydrogenase (EC 1.2.1.3) no 0.49
    5 GFF6008 Citrate synthase (si) (EC 2.3.3.1) no 0.48
    6 GFF4995 no description no 0.48
    7 GFF1777 Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily no 0.47
    8 GFF172 hypothetical protein no 0.47
    9 GFF5013 Citronellyl-CoA dehydrogenase no 0.46
    10 GFF5754 Flagellar cap protein FliD no 0.46
    11 GFF4714 putative lipoprotein no 0.46
    12 GFF2486 Urease gamma subunit (EC 3.5.1.5) no 0.46
    13 GFF250 Homoserine/homoserine lactone efflux protein no 0.45
    14 GFF4399 hypothetical protein no 0.45
    15 GFF5423 FIG00537205: hypothetical protein no 0.45
    16 GFF3663 Permease of the drug/metabolite transporter (DMT) superfamily no 0.45
    17 GFF5291 Ferrichrome-iron receptor no 0.45
    18 GFF6165 Hydroxymethylpyrimidine ABC transporter, transmembrane component no 0.44
    19 GFF5518 Nudix hydrolase family protein KPN_02621 no 0.44
    20 GFF4262 hypothetical protein no 0.44

    Or look for negative cofitness