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Cofit
Protein
Homologs
Top cofit genes for GFF1456 from
Variovorax sp. SCN45
probable integrase/recombinase protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF6590
Niacin transporter NiaP
no
0.56
2
GFF2999
Putative transmembrane protein
no
0.50
3
GFF5117
Transcriptional regulator, LysR family
no
0.46
4
GFF4374
UPF0758 family protein
no
0.46
5
GFF6996
Flagellar hook-basal body complex protein FliE
no
0.45
6
GFF6103
no description
no
0.45
7
GFF7162
DNA helicase II related protein
no
0.45
8
GFF3291
no description
no
0.45
9
GFF1273
no description
no
0.44
10
GFF2293
tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207)
no
0.42
11
GFF1672
BUG/TctC family periplasmic protein
no
0.42
12
GFF1818
FIG00932412: hypothetical protein
0.23
0.42
13
GFF2923
Tripartite tricarboxylate transporter TctC family
no
0.41
14
GFF2480
Urease accessory protein UreG
no
0.41
15
GFF6902
Oxidoreductase, short-chain dehydrogenase/reductase family
no
0.41
16
GFF4315
Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1)
no
0.41
17
GFF1365
no description
no
0.41
18
GFF6420
carboxyl-terminal protease
no
0.40
19
GFF3146
no description
no
0.40
20
GFF1274
Glutamate racemase (EC 5.1.1.3)
0.15
0.40
Or look for
negative cofitness