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  • Top cofit genes for GFF1455 from Variovorax sp. SCN45

    DNA polymerase II (EC 2.7.7.7)
    SEED: DNA polymerase II (EC 2.7.7.7)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1920 Cysteine dioxygenase (EC 1.13.11.20) no 0.70
    2 GFF5467 Hydroxymethylpyrimidine ABC transporter, substrate-binding component no 0.58
    3 GFF1375 Transcriptional regulator, LysR family no 0.57
    4 GFF1678 Transcriptional regulator, GntR family no 0.56
    5 GFF1769 Urease accessory protein UreD no 0.56
    6 GFF1878 Bll6165 protein no 0.55
    7 GFF3389 Glycosyl transferases, related to UDP-glucuronosyltransferase no 0.53
    8 GFF12 Two-component system sensor histidine kinase no 0.53
    9 GFF1508 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) no 0.53
    10 GFF4307 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.52
    11 GFF118 putative membrane protein no 0.51
    12 GFF5095 hypothetical protein no 0.50
    13 GFF99 KEGG: RNA polymerase sigma-70 factor, ECF subfamily no 0.50
    14 GFF4032 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) no 0.50
    15 GFF6814 NADH dehydrogenase (EC 1.6.99.3) no 0.49
    16 GFF3177 hypothetical protein no 0.49
    17 GFF4828 no description no 0.49
    18 GFF5685 Gluconate 5-dehydrogenase (EC 1.1.1.69) no 0.48
    19 GFF6867 no description no 0.48
    20 GFF199 Ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA no 0.48

    Or look for negative cofitness