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    • Top cofit genes for GFF1452 from Variovorax sp. SCN45

    Predicted gluconate TRAP family transporter, DctM subunit
    SEED: Predicted gluconate TRAP family transporter, DctM subunit

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4661 no description no 0.54
    2 GFF1437 Transcriptional regulator, LysR family no 0.54
    3 GFF5193 Galactofuranose ABC transporter, substrate-binding protein 0.42 0.54
    4 GFF4619 Altronate dehydratase (EC 4.2.1.7) no 0.52
    5 GFF6588 Glyoxylate carboligase (EC 4.1.1.47) no 0.50
    6 GFF1021 Transcriptional regulator, Xre-family with cupin domain no 0.49
    7 GFF3444 BUG/TctC family periplasmic protein no 0.49
    8 GFF2862 FIG01199081: hypothetical protein no 0.49
    9 GFF6699 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.48
    10 GFF2692 hypothetical protein 0.22 0.47
    11 GFF1650 NmrA-like no 0.47
    12 GFF6020 UPF0246 protein YaaA no 0.46
    13 GFF1754 Nicel/Cobalt-specific TonB-dependent outer membrane receptor no 0.45
    14 GFF1621 Phosphonoacetaldehyde dehydrogenase (NAD+) no 0.45
    15 GFF6586 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) no 0.45
    16 GFF7344 Transcriptional regulator, LysR family no 0.44
    17 GFF1634 Ferrichrome-iron receptor no 0.44
    18 GFF6120 Exonuclease SbcC no 0.43
    19 GFF2014 hypothetical protein no 0.43
    20 GFF1430 hypothetical protein no 0.43

    Or look for negative cofitness