• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for GFF1448 from Variovorax sp. SCN45

    diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
    SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6262 Transcriptional regulator PhnF no 0.69
    2 GFF2617 no description no 0.67
    3 GFF6441 hypothetical protein no 0.67
    4 GFF5917 T6SS component TssB (ImpB/VipA) no 0.67
    5 GFF5959 Putative amidase R03093 no 0.67
    6 GFF6872 FIG00904907: hypothetical protein no 0.60
    7 GFF672 Transcriptional regulator, LysR family no 0.60
    8 GFF5518 Nudix hydrolase family protein KPN_02621 0.17 0.60
    9 GFF5636 Molybdenum ABC transporter, substrate-binding protein ModA no 0.59
    10 GFF4864 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) no 0.59
    11 GFF4181 hypothetical protein no 0.58
    12 GFF5101 Dihydroxy-acid dehydratase (EC 4.2.1.9) no 0.57
    13 GFF3822 RND efflux system, membrane fusion protein no 0.56
    14 GFF2227 Tricarboxylate transport protein TctC no 0.56
    15 GFF7192 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) no 0.56
    16 GFF1027 Ribonuclease BN no 0.55
    17 GFF1373 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) no 0.55
    18 GFF1421 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) no 0.55
    19 GFF2101 no description no 0.54
    20 GFF6870 FIG00904791: hypothetical protein no 0.54

    Or look for negative cofitness