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  • Top cofit genes for PS417_07355 from Pseudomonas simiae WCS417

    transcriptional regulator
    SEED: Cyn operon transcriptional activator
    KEGG: LysR family transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_20670 glycosyl transferase family 2 0.34 0.27
    2 PS417_20655 group 1 glycosyl transferase no 0.24
    3 PS417_21895 nuclease PIN no 0.23
    4 PS417_20660 hypothetical protein no 0.23
    5 PS417_20665 hypothetical protein no 0.20
    6 PS417_18840 chemotaxis protein no 0.20
    7 PS417_21230 cytochrome C no 0.20
    8 PS417_25100 hypothetical protein no 0.20
    9 PS417_08245 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase no 0.19
    10 PS417_20645 membrane protein no 0.19
    11 PS417_18170 phenol degradation protein meta 0.34 0.19
    12 PS417_08200 hypothetical protein no 0.18
    13 PS417_04900 amino acid ABC transporter substrate-binding protein no 0.18
    14 PS417_12520 hypothetical protein no 0.18
    15 PS417_22805 hypothetical protein no 0.18
    16 PS417_12195 ABC transporter permease no 0.18
    17 PS417_00635 sulfonate ABC transporter ATP-binding protein no 0.18
    18 PS417_17240 trigger factor 0.50 0.18
    19 PS417_06135 glycerol-3-phosphate acyltransferase 0.18 0.18
    20 PS417_08195 hypothetical protein no 0.17

    Or look for negative cofitness