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  • Top cofit genes for GFF1443 from Variovorax sp. SCN45

    Excinuclease ABC subunit A paralog of unknown function
    SEED: Excinuclease ABC subunit A paralog of unknown function
    KEGG: excinuclease ABC subunit A

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5957 Uncharacterized MFS-type transporter no 0.65
    2 GFF1439 putative inositol monophosphatase no 0.63
    3 GFF6526 Peptide-methionine (S)-S-oxide reductase MsrA (EC 1.8.4.11) no 0.57
    4 GFF4487 putative secreted protein no 0.56
    5 GFF755 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB no 0.55
    6 GFF5064 Exonuclease SbcC no 0.55
    7 GFF5150 Taurine ABC transporter, permease protein TauC no 0.55
    8 GFF1796 NADP-dependent malic enzyme (EC 1.1.1.40) no 0.54
    9 GFF5870 hypothetical protein no 0.54
    10 GFF4786 Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily no 0.54
    11 GFF2977 hypothetical protein no 0.54
    12 GFF5266 Transaldolase (EC 2.2.1.2) no 0.53
    13 GFF6037 Transcriptional regulator, Crp/Fnr family no 0.53
    14 GFF3754 Fumarylacetoacetate hydrolase family protein no 0.53
    15 GFF5868 hypothetical protein no 0.53
    16 GFF907 Transcriptional regulator, LysR family no 0.52
    17 GFF967 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.25 0.52
    18 GFF6642 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) no 0.52
    19 GFF5248 Outer membrane porin protein 32 precursor no 0.52
    20 GFF5487 Thymidine phosphorylase (EC 2.4.2.4) no 0.52

    Or look for negative cofitness