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  • Top cofit genes for GFF1438 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

    Putative type-1 secretion protein
    SEED: Putative type-1 secretion protein
    KEGG: ATP-binding cassette, subfamily C, bacterial

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1474 Melibiose operon regulatory protein no 0.54
    2 GFF1643 hypothetical protein no 0.52
    3 GFF338 Putative sensory transducer no 0.52
    4 GFF3601 Type III secretion protein SsaK no 0.51
    5 GFF3106 Ni/Fe-hydrogenase 2 B-type cytochrome subunit no 0.51
    6 GFF1434 FIG00732228: membrane protein no 0.50
    7 GFF4239 Putative inner membrane protein no 0.50
    8 GFF4057 putative cytoplasmic protein no 0.50
    9 GFF869 Protein ytfJ precursor no 0.50
    10 GFF186 FIG01045743: hypothetical protein no 0.50
    11 GFF3013 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) no 0.49
    12 GFF2022 hypothetical protein no 0.49
    13 GFF4753 Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, homologous to flagellar export components) no 0.48
    14 GFF75 Major fimbrial subunit StfA no 0.48
    15 GFF3703 Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) no 0.48
    16 GFF848 Ascorbate-specific PTS system, EIIB component (EC 2.7.1.69) no 0.48
    17 GFF2248 FIG00642734: hypothetical protein no 0.48
    18 GFF3157 Putative arylsulfate sulfotransferase (EC 2.8.2.22) no 0.47
    19 GFF1013 PTS system, mannose-specific IIB component (EC 2.7.1.69) no 0.47
    20 GFF4537 CrcB protein no 0.47

    Or look for negative cofitness