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  • Top cofit genes for GFF1437 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3391 Chlorogenate esterase no 0.64
    2 GFF7368 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.61
    3 GFF6066 Quinone oxidoreductase (EC 1.6.5.5) no 0.60
    4 GFF2605 Tricarboxylate transport sensor protein TctE no 0.59
    5 GFF3058 Demethylmenaquinone methyltransferase-like protein no 0.58
    6 GFF2239 no description no 0.55
    7 GFF1452 Predicted gluconate TRAP family transporter, DctM subunit no 0.54
    8 GFF5296 putative iron-regulated membrane protein no 0.52
    9 GFF5221 Phosphonoacetaldehyde hydrolase (EC 3.11.1.1) no 0.52
    10 GFF3655 no description no 0.51
    11 GFF3142 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits no 0.51
    12 GFF537 FIG00453455: hypothetical protein no 0.51
    13 GFF6184 hypothetical protein no 0.50
    14 GFF4846 Conjugative transfer protein TrbE no 0.50
    15 GFF4376 UPF0380 proteins YafZ and homologs no 0.50
    16 GFF2540 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases no 0.50
    17 GFF1617 Phosphonate uptake and metabolism regulator, LysR-family no 0.50
    18 GFF5193 Galactofuranose ABC transporter, substrate-binding protein no 0.49
    19 GFF1643 MbtH-like NRPS chaperone no 0.49
    20 GFF3517 Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1) no 0.48

    Or look for negative cofitness