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  • Top cofit genes for PS417_07300 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Glycine cleavage system transcriptional activator
    KEGG: LysR family transcriptional regulator, glycine cleavage system transcriptional activator

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_11475 membrane protein no 0.22
    2 PS417_18755 CrtK 0.30 0.22
    3 PS417_24125 hypothetical protein no 0.20
    4 PS417_27635 magnesium chelatase no 0.19
    5 PS417_21900 allophanate hydrolase no 0.18
    6 PS417_08790 pyruvate kinase no 0.17
    7 PS417_11175 AraC family transcriptional regulator 0.30 0.17
    8 PS417_00045 glycerol acyltransferase 0.12 0.17
    9 PS417_17065 catalase no 0.16
    10 PS417_15625 lactate dehydrogenase no 0.16
    11 PS417_13445 D-aminopeptidase no 0.16
    12 PS417_12135 peptidylprolyl isomerase no 0.16
    13 PS417_19630 LuxR family transcriptional regulator 0.28 0.16
    14 PS417_15370 kinase no 0.16
    15 PS417_02850 iron ABC transporter substrate-binding protein 0.41 0.16
    16 PS417_01825 chemotaxis protein no 0.16
    17 PS417_22175 amino acid transporter LysE 0.59 0.15
    18 PS417_01340 agmatine deiminase no 0.15
    19 PS417_15635 hypothetical protein no 0.15
    20 PS417_16880 deaminase/reductase no 0.15

    Or look for negative cofitness