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  • Top cofit genes for PS417_07280 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_02860 TonB-dependent receptor no 0.24
    2 PS417_22850 virulence factor family protein no 0.23
    3 PS417_22845 membrane protein no 0.22
    4 PS417_00630 nitrate ABC transporter substrate-binding protein no 0.22
    5 PS417_00045 glycerol acyltransferase no 0.21
    6 PS417_17270 D-alanyl-D-alanine endopeptidase no 0.21
    7 PS417_22410 hypothetical protein no 0.21
    8 PS417_04910 amino acid ABC transporter permease no 0.21
    9 PS417_15270 membrane protein 0.37 0.20
    10 PS417_14030 hypothetical protein no 0.20
    11 PS417_07095 histidine kinase no 0.20
    12 PS417_03195 LysR family transcriptional regulator no 0.20
    13 PS417_12835 GNAT family acetyltransferase no 0.20
    14 PS417_06935 hydroxymethylglutaryl-CoA lyase no 0.20
    15 PS417_18705 succinate dehydrogenase no 0.20
    16 PS417_13350 phytanoyl-CoA dioxygenase no 0.19
    17 PS417_19635 lipid kinase no 0.19
    18 PS417_08340 type IV secretion protein Rhs no 0.19
    19 PS417_19630 LuxR family transcriptional regulator no 0.19
    20 PS417_02670 ABC transporter 0.23 0.19

    Or look for negative cofitness