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Cofit
Protein
Homologs
Top cofit genes for PS417_00720 from
Pseudomonas simiae WCS417
membrane protein
SEED: HlyD family secretion protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PS417
_00710
fusaric acid resistance protein
0.93
0.73
2
PS417
_25960
Acyl-CoA dehydrogenase (EC 1.3.8.7)
(from data)
0.72
0.72
3
PS417
_00715
required for octanoate transport, together with NodT, MFP, and FUSC proteins (PS417_00725, PS417_00720, PS417_00710)
(from data)
0.93
0.59
4
PS417
_00725
RND transporter
0.87
0.56
5
PS417
_17395
MFS transporter
no
0.53
6
PS417
_06060
phosphoenolpyruvate carboxylase
0.57
0.51
7
PS417
_17390
DSBA oxidoreductase
0.26
0.47
8
PS417
_22065
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
(from data)
no
0.44
9
PS417
_24805
Fis family transcriptional regulator
0.25
0.43
10
PS417
_21010
ribonuclease activity regulator protein RraA
0.65
0.42
11
PS417
_24810
aldehyde dehydrogenase
0.24
0.42
12
PS417
_25975
Acyl-CoA dehydrogenase (EC 1.3.8.7)
(from data)
no
0.42
13
PS417
_04735
LysR family transcriptional regulator
no
0.36
14
PS417
_11700
ligand-gated channel
no
0.36
15
PS417
_08430
phospho-2-dehydro-3-deoxyheptonate aldolase
0.24
0.35
16
PS417
_02725
hypothetical protein
no
0.34
17
PS417
_16525
isocitrate dehydrogenase
no
0.33
18
PS417
_07270
LysR family transcriptional regulator
0.18
0.33
19
PS417
_19965
histidine kinase
0.32
0.32
20
PS417
_00705
MarR family transcriptional regulator
0.67
0.30
Or look for
negative cofitness