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  • Top cofit genes for PS417_00720 from Pseudomonas simiae WCS417

    membrane protein
    SEED: HlyD family secretion protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_00710 fusaric acid resistance protein 0.93 0.73
    2 PS417_25960 Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) 0.72 0.72
    3 PS417_00715 required for octanoate transport, together with NodT, MFP, and FUSC proteins (PS417_00725, PS417_00720, PS417_00710) (from data) 0.93 0.59
    4 PS417_00725 RND transporter 0.87 0.56
    5 PS417_17395 MFS transporter no 0.53
    6 PS417_06060 phosphoenolpyruvate carboxylase 0.57 0.51
    7 PS417_17390 DSBA oxidoreductase 0.26 0.47
    8 PS417_22065 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (from data) no 0.44
    9 PS417_24805 Fis family transcriptional regulator 0.25 0.43
    10 PS417_21010 ribonuclease activity regulator protein RraA 0.65 0.42
    11 PS417_24810 aldehyde dehydrogenase 0.24 0.42
    12 PS417_25975 Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) no 0.42
    13 PS417_04735 LysR family transcriptional regulator no 0.36
    14 PS417_11700 ligand-gated channel no 0.36
    15 PS417_08430 phospho-2-dehydro-3-deoxyheptonate aldolase 0.24 0.35
    16 PS417_02725 hypothetical protein no 0.34
    17 PS417_16525 isocitrate dehydrogenase no 0.33
    18 PS417_07270 LysR family transcriptional regulator 0.18 0.33
    19 PS417_19965 histidine kinase 0.32 0.32
    20 PS417_00705 MarR family transcriptional regulator 0.67 0.30

    Or look for negative cofitness