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  • Top cofit genes for GFF143 from Variovorax sp. SCN45

    Dethiobiotin synthase BioD (EC 6.3.3.3)
    SEED: Dethiobiotin synthetase (EC 6.3.3.3)
    KEGG: dethiobiotin synthetase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2367 Transcriptional regulator, LysR family no 0.70
    2 GFF1190 Glycine oxidase ThiO (EC 1.4.3.19) no 0.65
    3 GFF1758 KEGG: carboxymethylenebutenolidase no 0.63
    4 GFF1792 Transcriptional regulator, IclR family no 0.62
    5 GFF7080 no description no 0.60
    6 GFF5390 RecA protein no 0.58
    7 GFF5003 FIG00348156: hypothetical protein no 0.57
    8 GFF2283 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.57
    9 GFF4576 BUG/TctC family periplasmic protein 0.30 0.57
    10 GFF3495 ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) 0.57 0.57
    11 GFF2111 Permease of the drug/metabolite transporter (DMT) superfamily no 0.56
    12 GFF7115 hypothetical protein no 0.56
    13 GFF2101 no description no 0.56
    14 GFF299 Ribosomal silencing factor RsfA no 0.55
    15 GFF2866 Uncharacterized MFS-type transporter no 0.55
    16 GFF683 Transcriptional regulator, LysR family no 0.55
    17 GFF2000 Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) 0.96 0.55
    18 GFF6870 FIG00904791: hypothetical protein no 0.54
    19 GFF2567 Molybdopterin-synthase adenylyltransferase (EC 2.7.7.80) 0.65 0.54
    20 GFF2189 Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3) no 0.54

    Or look for negative cofitness