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  • Top cofit genes for PS417_07205 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Permeases of the major facilitator superfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_09685 glucoamylase no 0.21
    2 PS417_06680 nuclease PIN no 0.20
    3 PS417_27865 LysR family transcriptional regulator 0.60 0.20
    4 PS417_20305 hypothetical protein no 0.18
    5 PS417_05295 DeoR faimly transcriptional regulator no 0.16
    6 PS417_12280 MerR family transcriptional regulator no 0.16
    7 PS417_19325 hypothetical protein no 0.16
    8 PS417_16555 cupin no 0.16
    9 PS417_15800 photosynthetic protein synthase I no 0.16
    10 PS417_18995 endonuclease no 0.16
    11 PS417_26990 RNA pyrophosphohydrolase no 0.16
    12 PS417_17765 iron ABC transporter permease no 0.15
    13 PS417_02865 peptidase 0.28 0.15
    14 PS417_02080 histidine ammonia-lyase no 0.15
    15 PS417_18150 chemotaxis protein CheY no 0.15
    16 PS417_15770 pyridoxine 5'-phosphate oxidase no 0.15
    17 PS417_27085 AraC family transcriptional regulator no 0.15
    18 PS417_20180 agmatinase 0.43 0.15
    19 PS417_21145 oxidoreductase no 0.15
    20 PS417_02755 membrane protein no 0.15

    Or look for negative cofitness