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Cofit
Protein
Homologs
Top cofit genes for GFF1418 from
Variovorax sp. SCN45
Transcriptional regulator, LysR family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF4038
Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family
no
0.66
2
GFF2970
BUG/TctC family periplasmic protein
no
0.58
3
GFF2326
Transcriptional regulator, LysR family
no
0.58
4
GFF2666
Membrane-bound lytic murein transglycosylase B
no
0.57
5
GFF4579
putative oxidoreductase, nitronate monooxygenase family
no
0.55
6
GFF4719
hypothetical protein
no
0.55
7
GFF3100
Aspartyl protease
no
0.53
8
GFF202
Transcriptional regulator, LysR family
no
0.51
9
GFF1194
Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Vanillate O-demethylase oxidoreductase (EC 1.14.13.-)
no
0.51
10
GFF4659
no description
no
0.50
11
GFF6393
5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13), C-terminal domain
no
0.50
12
GFF7101
hypothetical protein
no
0.50
13
GFF5752
Flagellin FliC
no
0.50
14
GFF414
Malate dehydrogenase (EC 1.1.1.37)
no
0.50
15
GFF1893
FIG00466861: hypothetical protein
no
0.49
16
GFF1192
no description
no
0.49
17
GFF5373
Xylose isomerase-like TIM-barrel protein KPN_00539
no
0.49
18
GFF7000
Flagellar L-ring protein FlgH
no
0.48
19
GFF1276
Sarcosine oxidase
no
0.48
20
GFF3506
Superoxide dismutase [Fe] (EC 1.15.1.1)
no
0.48
Or look for
negative cofitness