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Cofit
Protein
Homologs
Top cofit genes for PS417_07190 from
Pseudomonas simiae WCS417
MFS transporter
SEED: Transcription regulatory protein opdE
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PS417
_26035
glycine cleavage system protein R
0.64
0.23
2
PS417
_22210
AraC family transcriptional regulator
no
0.23
3
PS417
_26545
16S rRNA methyltransferase
no
0.23
4
PS417
_08245
CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase
no
0.23
5
PS417
_20160
cysteine synthase
no
0.23
6
PS417
_27035
FAD-linked oxidase
0.27
0.22
7
PS417
_17150
phosphonoacetaldehyde hydrolase
0.16
0.22
8
PS417
_27010
threonine dehydratase
0.72
0.21
9
PS417
_26740
homoserine acetyltransferase
no
0.21
10
PS417
_12290
sulfite reductase
0.76
0.21
11
PS417
_07020
chemotaxis protein
no
0.21
12
PS417
_25725
anthranilate synthase component I
no
0.21
13
PS417
_00185
tryptophan synthase subunit beta
0.68
0.21
14
PS417
_26355
Zn-dependent protease
no
0.21
15
PS417
_18600
isopropylmalate isomerase
0.34
0.20
16
PS417
_02415
phosphoserine phosphatase
no
0.20
17
PS417
_02000
glutamate synthase
no
0.20
18
PS417
_06115
multidrug transporter AcrB
0.57
0.20
19
PS417
_18595
3-isopropylmalate dehydratase
no
0.20
20
PS417
_15285
type VI secretion protein
no
0.20
Or look for
negative cofitness