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  • Top cofit genes for GFF1412 from Variovorax sp. SCN45

    Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-)
    SEED: Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5461 2-dehydrotetronate isomerase (EC 5.3.1.35) no 0.55
    2 GFF4132 Acyl-CoA dehydrogenase; probable dibenzothiophene desulfurization enzyme no 0.52
    3 GFF5769 Chemotaxis response - phosphatase CheZ no 0.52
    4 GFF6469 TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter no 0.52
    5 GFF6773 Transcriptional regulator, GntR family no 0.51
    6 GFF7411 no description no 0.50
    7 GFF3150 Transcriptional regulator, AsnC family no 0.50
    8 GFF3338 Threonine efflux protein no 0.50
    9 GFF3956 no description no 0.49
    10 GFF3701 FIG004694: Hypothetical protein no 0.49
    11 GFF5795 esterase, PHB depolymerase family no 0.49
    12 GFF2113 NADH dehydrogenase (EC 1.6.99.3) no 0.48
    13 GFF2065 Peptidase, M23/M37 family no 0.48
    14 GFF4189 NUDIX hydrolase no 0.48
    15 GFF1755 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.48
    16 GFF1364 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.47
    17 GFF2395 D-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.-) no 0.47
    18 GFF2983 Transcriptional regulator YfeR, LysR family no 0.46
    19 GFF423 Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73) no 0.46
    20 GFF3324 hypothetical protein no 0.46

    Or look for negative cofitness