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  • Top cofit genes for GFF141 from Variovorax sp. SCN45

    Transcriptional regulator, AraC family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7419 hypothetical protein no 0.57
    2 GFF6203 UDP-glucose 4-epimerase (EC 5.1.3.2) no 0.56
    3 GFF4192 no description no 0.56
    4 GFF1485 Transcriptional regulator, AraC family 0.28 0.56
    5 GFF4877 no description no 0.54
    6 GFF418 Endonuclease III (EC 4.2.99.18) 0.40 0.53
    7 GFF5426 Phosphoenolpyruvate synthase (EC 2.7.9.2) no 0.53
    8 GFF7211 Nitrilotriacetate monooxygenase component A (EC 1.14.13.-) no 0.52
    9 GFF5277 Sorbitol dehydrogenase (EC 1.1.1.14) 0.53 0.52
    10 GFF7027 no description no 0.52
    11 GFF4614 Transcriptional regulator, AraC family no 0.51
    12 GFF1952 Metallophosphoesterase no 0.50
    13 GFF6080 Putative deoxyribonuclease YjjV no 0.50
    14 GFF3283 ClpB protein no 0.49
    15 GFF3145 Two-component system response regulator QseB no 0.49
    16 GFF2705 Hydroxymethylpyrimidine ABC transporter, substrate-binding component no 0.49
    17 GFF6184 hypothetical protein no 0.49
    18 GFF7160 hypothetical protein no 0.49
    19 GFF6778 possible endonuclease/exonuclease/phosphatase family protein no 0.48
    20 GFF4688 Cobalt/zinc/cadmium efflux RND transporter, outer membrane protein CzcC no 0.48

    Or look for negative cofitness