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  • Top cofit genes for GFF1409 from Variovorax sp. SCN45

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7213 DNA polymerase II (EC 2.7.7.7) no 0.66
    2 GFF6732 High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) no 0.62
    3 GFF5412 no description no 0.58
    4 GFF3068 FIG00538108: hypothetical protein no 0.57
    5 GFF4482 Transcriptional regulator MraZ no 0.57
    6 GFF993 Type IV pilus biogenesis protein PilF no 0.56
    7 GFF2154 twitching motility protein PilJ no 0.56
    8 GFF3825 Autolysin sensor kinase (EC 2.7.3.-) no 0.55
    9 GFF5323 Type IV pilus biogenesis protein PilQ no 0.55
    10 GFF2847 histone-like nucleoid-structuring protein H-NS no 0.55
    11 GFF5490 Uncharacterized protein with LysM domain, COG1652 no 0.55
    12 GFF3810 Conserved membrane protein in copper uptake, YcnI / Copper metallochaperone PCu(A)C, inserts Cu(I) into cytochrome oxidase subunit II no 0.55
    13 GFF4432 Two-component system response regulator protein no 0.55
    14 GFF2509 Type IV fimbrial assembly protein PilC no 0.54
    15 GFF3470 Permease of the drug/metabolite transporter (DMT) superfamily no 0.54
    16 GFF4 VapC toxin protein no 0.54
    17 GFF2151 twitching motility protein PilG no 0.54
    18 GFF3826 Response regulator receiver:LytTr DNA-binding region no 0.54
    19 GFF2510 Type IV fimbrial assembly, ATPase PilB no 0.54
    20 GFF5418 Type IV fimbrial biogenesis protein PilY1 no 0.54

    Or look for negative cofitness