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Cofit
Protein
Homologs
Top cofit genes for GFF1409 from
Variovorax sp. SCN45
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF7213
DNA polymerase II (EC 2.7.7.7)
no
0.66
2
GFF6732
High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1)
no
0.62
3
GFF5412
no description
no
0.58
4
GFF3068
FIG00538108: hypothetical protein
no
0.57
5
GFF4482
Transcriptional regulator MraZ
no
0.57
6
GFF993
Type IV pilus biogenesis protein PilF
no
0.56
7
GFF2154
twitching motility protein PilJ
no
0.56
8
GFF3825
Autolysin sensor kinase (EC 2.7.3.-)
no
0.55
9
GFF5323
Type IV pilus biogenesis protein PilQ
no
0.55
10
GFF2847
histone-like nucleoid-structuring protein H-NS
no
0.55
11
GFF5490
Uncharacterized protein with LysM domain, COG1652
no
0.55
12
GFF3810
Conserved membrane protein in copper uptake, YcnI / Copper metallochaperone PCu(A)C, inserts Cu(I) into cytochrome oxidase subunit II
no
0.55
13
GFF4432
Two-component system response regulator protein
no
0.55
14
GFF2509
Type IV fimbrial assembly protein PilC
no
0.54
15
GFF3470
Permease of the drug/metabolite transporter (DMT) superfamily
no
0.54
16
GFF4
VapC toxin protein
no
0.54
17
GFF2151
twitching motility protein PilG
no
0.54
18
GFF3826
Response regulator receiver:LytTr DNA-binding region
no
0.54
19
GFF2510
Type IV fimbrial assembly, ATPase PilB
no
0.54
20
GFF5418
Type IV fimbrial biogenesis protein PilY1
no
0.54
Or look for
negative cofitness