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  • Top cofit genes for GFF1403 from Variovorax sp. SCN45

    MATE efflux family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3367 Septum site-determining protein MinC 0.27 0.60
    2 GFF5052 FAD-dependent oxidoreductase SPO0682 no 0.59
    3 GFF3847 LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24) no 0.58
    4 GFF6713 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) no 0.56
    5 GFF1700 hypothetical protein no 0.56
    6 GFF3081 no description no 0.55
    7 GFF4280 oxidoreductase FAD/NAD(P)-binding domain protein no 0.55
    8 GFF5825 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) no 0.55
    9 GFF2357 DNA repair protein RecN 0.20 0.54
    10 GFF6287 no description no 0.54
    11 GFF3303 Acetyltransferase, GNAT family no 0.54
    12 GFF4736 Nitrate ABC transporter, permease protein no 0.53
    13 GFF5673 Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-) no 0.52
    14 GFF6324 Kup system potassium uptake protein 0.27 0.51
    15 GFF5675 Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) no 0.51
    16 GFF2383 Oxygen-independent coproporphyrinogen-III oxidase-like protein YggW 0.45 0.51
    17 GFF5552 MaoC domain protein dehydratase no 0.51
    18 GFF1371 Fe-S protein, homolog of lactate dehydrogenase SO1521 no 0.50
    19 GFF945 Excinuclease ABC subunit B 0.48 0.50
    20 GFF5667 Transcriptional regulator, LysR family no 0.50

    Or look for negative cofitness