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Gene
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Cofit
Protein
Homologs
Top cofit genes for GFF1403 from
Variovorax sp. SCN45
MATE efflux family protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF3367
Septum site-determining protein MinC
0.27
0.60
2
GFF5052
FAD-dependent oxidoreductase SPO0682
no
0.59
3
GFF3847
LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24)
no
0.58
4
GFF6713
ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines)
no
0.56
5
GFF1700
hypothetical protein
no
0.56
6
GFF3081
no description
no
0.55
7
GFF4280
oxidoreductase FAD/NAD(P)-binding domain protein
no
0.55
8
GFF5825
Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1)
no
0.55
9
GFF2357
DNA repair protein RecN
0.20
0.54
10
GFF6287
no description
no
0.54
11
GFF3303
Acetyltransferase, GNAT family
no
0.54
12
GFF4736
Nitrate ABC transporter, permease protein
no
0.53
13
GFF5673
Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-)
no
0.52
14
GFF6324
Kup system potassium uptake protein
0.27
0.51
15
GFF5675
Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-)
no
0.51
16
GFF2383
Oxygen-independent coproporphyrinogen-III oxidase-like protein YggW
0.45
0.51
17
GFF5552
MaoC domain protein dehydratase
no
0.51
18
GFF1371
Fe-S protein, homolog of lactate dehydrogenase SO1521
no
0.50
19
GFF945
Excinuclease ABC subunit B
0.48
0.50
20
GFF5667
Transcriptional regulator, LysR family
no
0.50
Or look for
negative cofitness