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  • Top cofit genes for PS417_07120 from Pseudomonas simiae WCS417

    RNA polymerase sigma-H factor
    SEED: RNA polymerase sigma-H factor AlgT
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_02405 hypothetical protein 0.71 0.59
    2 PS417_21515 transcriptional regulator 0.90 0.55
    3 PS417_03705 2-alkenal reductase 0.96 0.51
    4 PS417_14960 ATPase 0.85 0.47
    5 PS417_14945 beta-lactamase no 0.47
    6 PS417_14965 transcriptional regulator 0.73 0.45
    7 PS417_02145 potassium transporter KefA no 0.44
    8 PS417_04275 hypothetical protein 0.64 0.38
    9 PS417_13805 4-amino-4-deoxy-L-arabinose transferase no 0.38
    10 PS417_13780 integrase no 0.37
    11 PS417_11825 transcriptional regulator 0.65 0.36
    12 PS417_05505 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.53 0.36
    13 PS417_25105 hypothetical protein no 0.34
    14 PS417_08000 beta-hydroxylase 0.54 0.33
    15 PS417_05910 glucan biosynthesis protein D 0.66 0.33
    16 PS417_13065 UDP pyrophosphate phosphatase 0.81 0.33
    17 PS417_23820 hypothetical protein 0.37 0.32
    18 PS417_02150 potassium/proton antiporter 0.90 0.32
    19 PS417_20930 50S rRNA methyltransferase 0.42 0.31
    20 PS417_17785 4-amino-4-deoxy-L-arabinose transferase no 0.31

    Or look for negative cofitness