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Cofit
Protein
Homologs
Top cofit genes for GFF140 from
Variovorax sp. SCN45
Putative transport protein
SEED: Cation transport protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF1890
3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2)
no
0.56
2
GFF1530
Nucleoside-diphosphate-sugar epimerases
0.26
0.55
3
GFF4332
Aldehyde dehydrogenase (EC 1.2.1.3)
no
0.54
4
GFF7184
hypothetical protein
no
0.53
5
GFF1878
Bll6165 protein
no
0.52
6
GFF2171
MBL-fold metallohydrolase SPO0683
no
0.52
7
GFF1250
Alkanesulfonate ABC transporter substrate-binding protein SsuA
no
0.51
8
GFF92
KEGG: general secretion pathway protein I
no
0.50
9
GFF4143
Dihydrofolate reductase (EC 1.5.1.3)
0.24
0.48
10
GFF4093
no description
no
0.48
11
GFF307
FIG143263: Glycosyl transferase
no
0.48
12
GFF2230
3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6)
no
0.48
13
GFF4551
Putative preQ0 transporter YhhQ
no
0.47
14
GFF1831
TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 3
no
0.47
15
GFF6460
Sensor protein BasS/PmrB (activates BasR/PmrA)
no
0.46
16
GFF3389
Glycosyl transferases, related to UDP-glucuronosyltransferase
0.34
0.46
17
GFF2713
Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily
no
0.46
18
GFF7321
Sensor histidine kinase GlrK
no
0.46
19
GFF4144
Prolyl endopeptidase (EC 3.4.21.26)
no
0.45
20
GFF6444
no description
no
0.45
Or look for
negative cofitness