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  • Top cofit genes for GFF1396 from Variovorax sp. SCN45

    TRAP-type C4-dicarboxylate transport system, periplasmic component
    SEED: TRAP-type C4-dicarboxylate transport system, periplasmic component

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3146 no description no 0.61
    2 GFF2538 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) no 0.56
    3 GFF5292 no description no 0.56
    4 GFF2200 sigma-54-dependent transcriptional regulator no 0.56
    5 GFF461 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.55
    6 GFF6556 hypothetical protein no 0.54
    7 GFF4305 ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.53
    8 GFF1563 no description no 0.53
    9 GFF856 no description no 0.53
    10 GFF7330 Transcription elongation factor no 0.53
    11 GFF865 hypothetical protein no 0.53
    12 GFF1259 no description no 0.52
    13 GFF5681 Predicted gluconate TRAP family transporter, DctM subunit no 0.52
    14 GFF2951 Arsenate reductase (EC 1.20.4.1) glutaredoxin-coupled, glutaredoxin-like family no 0.51
    15 GFF3241 hypothetical protein no 0.50
    16 GFF6968 no description no 0.49
    17 GFF7083 Mobile element protein no 0.49
    18 GFF5154 DNA-binding transcriptional regulator, MocR family / aminotransferase domain no 0.49
    19 GFF5729 Methyl-accepting chemotaxis sensor/transducer protein no 0.48
    20 GFF2127 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly no 0.47

    Or look for negative cofitness