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Cofit
Protein
Homologs
Top cofit genes for PS417_07080 from
Pseudomonas simiae WCS417
porin
SEED: Tricarboxylate porin OpdH
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PS417
_07090
histidine kinase
0.97
0.89
2
PS417
_07065
tripartite tricarboxylate transporter TctA
0.97
0.85
3
PS417
_07070
membrane protein
0.95
0.82
4
PS417
_07075
tricarboxylic transport membrane protein
0.96
0.81
5
PS417
_07085
transcriptional regulator
0.97
0.74
6
PS417
_05540
histidine kinase
no
0.70
7
PS417
_05165
cytosol aminopeptidase
0.63
0.62
8
PS417
_05510
alpha/beta hydrolase
no
0.54
9
PS417
_26985
phosphoenolpyruvate-protein phosphotransferase
0.36
0.37
10
PS417
_02480
DNA mismatch repair protein
no
0.33
11
PS417
_23210
serine acetyltransferase
0.50
0.33
12
PS417
_12205
hypothetical protein
no
0.32
13
PS417
_23215
RNA methyltransferase
no
0.32
14
PS417
_12200
microcin ABC transporter permease
0.38
0.28
15
PS417
_23735
hypothetical protein
no
0.28
16
PS417
_02485
tRNA delta(2)-isopentenylpyrophosphate transferase
0.43
0.28
17
PS417
_21035
multidrug transporter
0.47
0.27
18
PS417
_07635
transcription-repair coupling factor
0.31
0.27
19
PS417
_26695
uracil phosphoribosyltransferase
0.36
0.25
20
PS417
_12195
ABC transporter permease
no
0.25
Or look for
negative cofitness