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Cofit
Protein
Homologs
Top cofit genes for PS417_07060 from
Pseudomonas simiae WCS417
membrane protein
SEED: Ammonia monooxygenase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PS417
_25840
SpoVR family protein
0.75
0.27
2
PS417
_25830
serine/threonine protein kinase
0.71
0.25
3
PS417
_25835
hypothetical protein
no
0.23
4
PS417
_12200
microcin ABC transporter permease
no
0.23
5
PS417
_11245
RNA polymerase subunit sigma-24
no
0.23
6
PS417
_23320
heme oxygenase
no
0.22
7
PS417
_00335
cytochrome B561
no
0.22
8
PS417
_08135
3-phosphoshikimate 1-carboxyvinyltransferase
no
0.22
9
PS417
_12120
IclR family transcriptional regulator
no
0.22
10
PS417
_15440
iron ABC transporter substrate-binding protein
no
0.21
11
PS417
_14875
polyisoprenoid-binding protein
0.21
0.21
12
PS417
_00300
cytochrome B559 subunit alpha
0.57
0.21
13
PS417
_01975
pilus assembly protein PilQ
0.28
0.20
14
PS417
_08830
membrane protein
no
0.20
15
PS417
_12795
alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase
no
0.19
16
PS417
_24560
ferrous iron transporter
no
0.19
17
PS417
_17095
spore coat protein
0.13
0.19
18
PS417
_10935
xylose transporter
no
0.19
19
PS417
_06120
hypothetical protein
no
0.19
20
PS417
_00800
lipoprotein
no
0.19
Or look for
negative cofitness