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  • Top cofit genes for GFF1385 from Variovorax sp. SCN45

    Multidrug resistance transporter, Bcr/CflA family
    SEED: MFS family multidrug efflux protein, similarity to bicyclomycin resistance protein Bcr
    KEGG: MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6998 Flagellar basal-body rod protein FlgB no 0.57
    2 GFF6820 hypothetical protein no 0.55
    3 GFF1755 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.54
    4 GFF3518 no description no 0.53
    5 GFF4844 Conjugative transfer protein TrbL no 0.52
    6 GFF2185 Acetyltransferase, GNAT family no 0.52
    7 GFF5878 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) no 0.51
    8 GFF2413 hypothetical protein no 0.51
    9 GFF3246 hypothetical protein no 0.50
    10 GFF3525 Protein tyrosine/serine phosphatase no 0.50
    11 GFF6384 Peptide synthase no 0.50
    12 GFF2590 Isocitrate dehydrogenase [NAD] (EC 1.1.1.41) no 0.49
    13 GFF4280 oxidoreductase FAD/NAD(P)-binding domain protein no 0.49
    14 GFF1652 Uncharacterized MFS-type transporter no 0.49
    15 GFF193 Two-component sensor PilS no 0.48
    16 GFF1655 no description no 0.48
    17 GFF313 FIG027190: Putative transmembrane protein no 0.48
    18 GFF1683 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) no 0.48
    19 GFF6912 L-sorbosone dehydrogenase 0.26 0.48
    20 GFF6592 hypothetical protein no 0.47

    Or look for negative cofitness