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  • Top cofit genes for GFF1379 from Variovorax sp. SCN45

    Uncharacterized MFS-type transporter
    SEED: Nitrate/nitrite transporter

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1920 Cysteine dioxygenase (EC 1.13.11.20) no 0.59
    2 GFF1771 Hydroxymethylpyrimidine ABC transporter, substrate-binding component no 0.54
    3 GFF25 Alcohol dehydrogenase (EC 1.1.1.1) no 0.51
    4 GFF842 hypothetical protein no 0.51
    5 GFF3541 hypothetical protein no 0.50
    6 GFF7260 hypothetical protein no 0.50
    7 GFF6576 Conjugative transfer protein TrbE no 0.49
    8 GFF2469 hypothetical protein no 0.49
    9 GFF6572 Conjugative transfer protein TrbG no 0.49
    10 GFF4822 Thiamine pyrophosphate-requiring enzymes no 0.48
    11 GFF4135 Acyl-CoA dehydrogenase; probable dibenzothiophene desulfurization enzyme no 0.48
    12 GFF2186 no description no 0.48
    13 GFF5818 Two-component transcriptional response regulator, NarL/FixJ family no 0.48
    14 GFF2083 putative periplasmic membrane protein no 0.47
    15 GFF4267 Transcriptional regulator, AraC family no 0.47
    16 GFF1435 BUG/TctC family periplasmic protein no 0.47
    17 GFF3819 hypothetical protein no 0.47
    18 GFF2749 hypothetical protein no 0.47
    19 GFF7352 1,2-phenylacetyl-CoA epoxidase, subunit D (EC 1.14.13.149) no 0.47
    20 GFF2427 Transcriptional regulator, MarR family no 0.47

    Or look for negative cofitness