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  • Top cofit genes for GFF137 from Variovorax sp. SCN45

    Transcriptional regulator PA4174, LysR family
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF443 Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family no 0.50
    2 GFF7076 no description no 0.45
    3 GFF3335 no description no 0.42
    4 GFF3460 Urea ABC transporter, ATPase protein UrtE no 0.42
    5 GFF4879 Transcriptional regulator, Xre family no 0.42
    6 GFF4934 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) no 0.42
    7 GFF5917 T6SS component TssB (ImpB/VipA) 0.40 0.41
    8 GFF2993 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases no 0.41
    9 GFF4840 FIG00956188: hypothetical protein no 0.41
    10 GFF924 hypothetical protein no 0.41
    11 GFF2777 Uncharacterized UPF0721 integral membrane protein no 0.41
    12 GFF6365 T6SS AAA+ chaperone ClpV (TssH) no 0.41
    13 GFF195 RidA/YER057c/UK114 superfamily, group 1 no 0.40
    14 GFF2705 Hydroxymethylpyrimidine ABC transporter, substrate-binding component no 0.40
    15 GFF6543 Transcriptional regulator, LysR family no 0.40
    16 GFF7385 hypothetical protein no 0.40
    17 GFF5381 Transcriptional regulator, LysR family no 0.40
    18 GFF4572 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.39
    19 GFF1219 SAM-dependent methyltransferase no 0.39
    20 GFF608 VgrG protein no 0.39

    Or look for negative cofitness