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  • Top cofit genes for GFF1367 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3386 hypothetical protein no 0.48
    2 GFF7312 Phosphoglycerate mutase (EC 5.4.2.11) no 0.47
    3 GFF3753 Hydroxymethylpyrimidine ABC transporter, substrate-binding component no 0.46
    4 GFF3575 no description no 0.45
    5 GFF7146 Putative oxidoreductase in 4-hydroxyproline catabolic gene cluster no 0.45
    6 GFF7410 no description no 0.45
    7 GFF3435 predicted integral membrane protein no 0.44
    8 GFF1551 hypothetical protein no 0.44
    9 GFF6239 Catalase KatE-intracellular protease (EC 1.11.1.6) 0.31 0.43
    10 GFF2945 Possible glyoxylase family protein (Lactoylglutathione lyase) (EC 4.4.1.5) no 0.42
    11 GFF2975 SAM-dependent methyltransferase no 0.42
    12 GFF6294 Cell division protein no 0.42
    13 GFF4690 Cobalt/zinc/cadmium efflux RND transporter, transmembrane protein CzcA no 0.42
    14 GFF3396 Benzoate ABC transporter, permease protein 1 no 0.41
    15 GFF3889 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) no 0.41
    16 GFF4117 Translation elongation factor Tu no 0.41
    17 GFF2649 putative autotransporter protein no 0.41
    18 GFF7375 Arginine:pyruvate transaminase no 0.41
    19 GFF2990 Probable hydrolase protein (EC 3.-.-.-) no 0.41
    20 GFF6274 Ketosteroid isomerase-related protein no 0.41

    Or look for negative cofitness