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  • Top cofit genes for GFF1366 from Variovorax sp. SCN45

    Uncharacterized MFS-type transporter
    SEED: Putative drug efflux protein
    KEGG: MFS transporter, DHA1 family, arabinose polymer transporter

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6723 Cysteine desulfurase (EC 2.8.1.7) no 0.66
    2 GFF1713 no description no 0.63
    3 GFF740 Uncharacterized protein YdcJ no 0.62
    4 GFF4439 Probable transmembrane protein no 0.58
    5 GFF101 Phosphate-binding DING protein (related to PstS) no 0.56
    6 GFF2153 type IV pili signal transduction protein PilI no 0.56
    7 GFF3743 Twitching motility protein PilT 0.22 0.55
    8 GFF3986 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.55
    9 GFF2491 Threonine-synthase-like protein 3 no 0.55
    10 GFF3825 Autolysin sensor kinase (EC 2.7.3.-) no 0.54
    11 GFF3886 Putative transmembrane protein no 0.54
    12 GFF5416 Type IV fimbrial biogenesis protein PilW no 0.54
    13 GFF879 BUG/TctC family periplasmic protein no 0.53
    14 GFF4507 no description no 0.53
    15 GFF109 Protein lysine acetyltransferase Pat (EC 2.3.1.-) no 0.53
    16 GFF2519 FIG016425: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) no 0.52
    17 GFF3826 Response regulator receiver:LytTr DNA-binding region no 0.52
    18 GFF6075 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 0.43 0.52
    19 GFF3402 no description no 0.52
    20 GFF5418 Type IV fimbrial biogenesis protein PilY1 no 0.52

    Or look for negative cofitness