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  • Top cofit genes for GFF1358 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    KEGG: LysR family transcriptional regulator, glycine cleavage system transcriptional activator

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF545 hypothetical protein no 0.64
    2 GFF6284 Cytochrome b561 no 0.54
    3 GFF2410 Intracellular protease no 0.53
    4 GFF4917 no description no 0.52
    5 GFF2827 Bacterioferritin (EC 1.16.3.1) no 0.52
    6 GFF6456 Lipid A phosphoethanolamine transferase, putative no 0.51
    7 GFF5052 FAD-dependent oxidoreductase SPO0682 no 0.50
    8 GFF2809 Putative transcription regulator no 0.50
    9 GFF1424 Phenylacetate ABC transporter, permease protein 2 no 0.50
    10 GFF5430 Uncharacterized iron-regulated membrane protein; Iron-uptake factor PiuB no 0.49
    11 GFF5259 Na+/solute symporter no 0.48
    12 GFF2521 FIG00931781: hypothetical protein no 0.48
    13 GFF267 no description no 0.48
    14 GFF794 KEGG: RNA polymerase sigma-70 factor, ECF subfamily no 0.48
    15 GFF3442 RidA/YER057c/UK114 superfamily protein no 0.47
    16 GFF4886 hypothetical protein no 0.46
    17 GFF6522 Zinc-regulated outer membrane receptor 0.14 0.46
    18 GFF1967 FAD linked oxidase-like no 0.45
    19 GFF156 Glycosyl transferase, group 2 family no 0.45
    20 GFF4408 3-methylmercaptopropionyl-CoA ligase (EC 6.2.1.44) of DmdB2 type no 0.44

    Or look for negative cofitness