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  • Top cofit genes for PS417_06880 from Pseudomonas simiae WCS417

    RNA polymerase sigma factor
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_08190 membrane protein no 0.22
    2 PS417_15845 membrane protein no 0.21
    3 PS417_07770 hypothetical protein no 0.20
    4 PS417_22050 ribonuclease BN no 0.19
    5 PS417_05705 pyocin R2, holin no 0.18
    6 PS417_20655 group 1 glycosyl transferase no 0.18
    7 PS417_08225 acetolactate synthase no 0.18
    8 PS417_01510 hypothetical protein no 0.18
    9 PS417_19645 chemotaxis protein no 0.17
    10 PS417_09965 hypothetical protein no 0.17
    11 PS417_06645 RNA polymerase-associated protein RapA no 0.17
    12 PS417_09505 hypothetical protein no 0.17
    13 PS417_09440 MerR family transcriptional regulator no 0.17
    14 PS417_27585 diaminopimelate epimerase no 0.17
    15 PS417_03045 hypothetical protein 0.66 0.17
    16 PS417_08185 glycosyl transferase no 0.17
    17 PS417_19755 flagellar motor switch protein FliM no 0.16
    18 PS417_09775 DeoR faimly transcriptional regulator no 0.16
    19 PS417_06400 succinylglutamate desuccinylase no 0.16
    20 PS417_08220 epimerase no 0.16

    Or look for negative cofitness