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  • Top cofit genes for GFF134 from Variovorax sp. SCN45

    putative oxidoreductase (AsfA-like), putative L-aspartate oxidase( EC:1.4.3.16 )
    SEED: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3227 no description no 0.57
    2 GFF2727 Outer membrane protein romA no 0.56
    3 GFF4086 no description no 0.54
    4 GFF4575 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.54
    5 GFF6016 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) no 0.51
    6 GFF437 Antiholin-like protein LrgA no 0.51
    7 GFF265 RND efflux system, membrane fusion protein no 0.51
    8 GFF2715 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) no 0.49
    9 GFF2811 Transcriptional regulator, YafY family no 0.49
    10 GFF1415 Lactoylglutathione lyase and related lyases no 0.48
    11 GFF627 Secretion protein HlyD no 0.48
    12 GFF1589 FIG00765372: hypothetical protein no 0.48
    13 GFF4095 no description no 0.47
    14 GFF324 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.26 0.46
    15 GFF7273 UDP-glucose 4-epimerase (EC 5.1.3.2) no 0.46
    16 GFF1734 no description no 0.46
    17 GFF2500 Mutator MutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) no 0.46
    18 GFF6342 Mobile element protein no 0.46
    19 GFF6421 ATPase, AAA family no 0.45
    20 GFF878 COGs COG2343 no 0.45

    Or look for negative cofitness